SOFTWARE TOOLS
Source code for the programs described below is available at my github profile page: https://github.com/nkylilis
CHEMCOMMS-CALCULATOR
CAD tool that automatically identifies orthogonal chemical communication channels for the design of synthetic consortia
Publication: Kylilis, N., Tuza, Z. A., Stan, G. B., & Polizzi, K. M. (2018). Tools for engineering coordinated system behaviour in synthetic microbial consortia. Nature communications, 9(1), 2677.
GENE-EXPRESSION-RATE-CALCULATOR
Matlab program for automatic calculation of gene expression rate from time-course fluorescence assays on microplate-reader for bacterial cells
Unpublished
GROWTH-RATE-CALCULATOR
Matlab program for automatic calculation of bacterial growth rate in time-course microplate experiments
Unpublished